BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C09LP1|AL429039
(901 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1383 1758 0.0
>3x_Contig1383
Length = 6139
Score = 1758 bits (887), Expect = 0.0
Identities = 901/903 (99%), Gaps = 2/903 (0%)
Strand = Plus / Minus
Query: 1 taaatatagcatatggcgaaacagttccggtggatggtttgattgtgatggaatgtgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1974 taaatatagcatatggcgaaacagttccggtggatggtttgattgtgatggaatgtgctc 1915
Query: 61 ttaaaccagagattggacaatccggcaatagtctagaagtccaaggtcccatacatagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1914 ttaaaccagagattggacaatccggcaatagtctagaagtccaaggtcccatacatagaa 1855
Query: 121 caacctggtcaacgtccaaaaggtcaactggttcttgtaaacgttgttcttctggatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1854 caacctggtcaacgtccaaaaggtcaactggttcttgtaaacgttgttcttctggatcat 1795
Query: 181 caactgttggaatgtacgatactcccgctgcggcacactgatcgttgaaatgcaactgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1794 caactgttggaatgtacgatactcccgctgcggcacactgatcgttgaaatgcaactgtg 1735
Query: 241 acactttgcccaggattaaatccactgccccagtctccattgccttcaacagtagatagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1734 acactttgcccaggattaaatccactgccccagtctccattgccttcaacagtagatagt 1675
Query: 301 gagtgaatttgaaaggatgtacttgagcagtggagtcagttccaccaagagatgaccaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1674 gagtgaatttgaaaggatgtacttgagcagtggagtcagttccaccaagagatgaccaat 1615
Query: 361 ctctcaccaaccgttttttgatccagttcaaatcactaggtagacgtaatgggtctttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1614 ctctcaccaaccgttttttgatccagttcaaatcactaggtagacgtaatgggtctttag 1555
Query: 421 ataatgcaatcgaggattttgtatccaactccgatgcaggtgcctcgtcctcttcatcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 ataatgcaatcgaggattttgtatccaactccgatgcaggtgcctcgtcctcttcatcat 1495
Query: 481 cttctccgtaactatattcgtaatcttcgtcgtcttcagtggtgcccactctggaaacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1494 cttctccgtaactatattcgtaatcttcgtcgtcttcagtggtgcccactctggaaacag 1435
Query: 541 gttcgttgttcaccactgcacatgcttttttggatttctttttctgcgatggctttgctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 gttcgttgttcaccactgcacatgcttttttggatttctttttctgcgatggctttgctc 1375
Query: 601 ttgaggtagtctttccatcattactagcataactttcgtcgtcatcgccgtcattactat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 ttgaggtagtctttccatcattactagcataactttcgtcgtcatcgccgtcattactat 1315
Query: 661 tatcgttgacactgcttccagtttcttttggatctaacgaaacggtatcatcttgaacgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 tatcgttgacactgcttccagtttcttttggatctaacgaaacggtatcatcttgaacgt 1255
Query: 721 tggcctcaagggaaactgtggtcaaccgacggtaatcccatttggtttcaccgttatact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 tggcctcaagggaaactgtggtcaaccgacggtaatcccatttggtttcaccgttatact 1195
Query: 781 cgtcactcaattcttgatggagttggaaagaaagtgggacaatctgctgtgggaaag-cc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1194 cgtcactcaattcttgatggagttggaaagaaagtgggacaatctgctgtgggaaagccc 1135
Query: 840 acatcgctagtaaaccaccagctttaccagaggcaccg-cagctacacgtttagactcta 898
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1134 acatcgctagtaaaccaccagctttaccagaggcaccgccagctacacgtttagactcta 1075
Query: 899 taa 901
|||
Sbjct: 1074 taa 1072
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6282
Number of Sequences: 1807
Number of extensions: 6282
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 901
length of database: 10,358,551
effective HSP length: 16
effective length of query: 885
effective length of database: 10,329,639
effective search space: 9141730515
effective search space used: 9141730515
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)